Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm24423-201ENSMUST00000101982 106 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm22845-201ENSMUST00000157712 104 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm24240-201ENSMUST00000157785 135 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm24546-201ENSMUST00000158652 102 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm22307-201ENSMUST00000180019 107 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm25412-201ENSMUST00000180258 107 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm28508-201ENSMUST00000188016 696 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm28953-201ENSMUST00000188336 697 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm5368-201ENSMUST00000189012 589 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm34583-203ENSMUST00000202586 454 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm7034-201ENSMUST00000218638 645 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 AC133189.2-201ENSMUST00000228527 392 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Snord82-201ENSMUST00000082889 70 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm25008-201ENSMUST00000083809 81 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gas8-203ENSMUST00000212923 3469 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.28□□□□□ -1.08
Trim35Q8C006 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim35Q8C006 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim35Q8C006 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trim35Q8C006 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC8.27□□□□□ -1.08
Trim35Q8C006 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC8.27□□□□□ -1.08
Trim35Q8C006 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trim35Q8C006 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.08
Trim35Q8C006 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm25022-201ENSMUST00000102205 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm25232-201ENSMUST00000104502 132 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm15355-201ENSMUST00000118929 285 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm11343-201ENSMUST00000120579 599 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm22027-201ENSMUST00000122737 127 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm2830-201ENSMUST00000140330 385 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm25720-201ENSMUST00000157503 105 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm26186-201ENSMUST00000157689 125 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm24838-201ENSMUST00000158684 130 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm4222-201ENSMUST00000165784 470 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-6-201ENSMUST00000177790 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-3-201ENSMUST00000178082 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-7-201ENSMUST00000178635 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-10-201ENSMUST00000179320 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-5-201ENSMUST00000179352 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-2-201ENSMUST00000179447 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-9-201ENSMUST00000179752 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-4-201ENSMUST00000179923 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Mir467a-8-201ENSMUST00000180070 83 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm35108-201ENSMUST00000194321 699 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm33191-201ENSMUST00000195604 699 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm7128-201ENSMUST00000211639 533 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms