Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 AC133910.1-201ENSMUST00000228128 624 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm22220-201ENSMUST00000082671 149 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm19514-201ENSMUST00000206856 4489 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm31258-201ENSMUST00000194532 3297 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm25096-201ENSMUST00000104043 129 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm26950-201ENSMUST00000182734 498 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 V1rg10-201ENSMUST00000183378 937 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC7.08□□□□□ -1.28
Usp47Q8BY87 AC112142.1-206ENSMUST00000228136 982 ntBASIC7.08□□□□□ -1.28
Usp47Q8BY87 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp47Q8BY87 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm42535-201ENSMUST00000197312 1399 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp47Q8BY87 AC159326.1-201ENSMUST00000219989 1302 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm23879-201ENSMUST00000116874 126 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm15297-201ENSMUST00000117795 290 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm12039-201ENSMUST00000118219 180 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp47Q8BY87 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm25846-201ENSMUST00000158013 135 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp47Q8BY87 Gm36986-201ENSMUST00000195320 353 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 AC125399.1-201ENSMUST00000224236 595 ntBASIC7.07□□□□□ -1.28
Usp47Q8BY87 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp47Q8BY87 Gm45222-201ENSMUST00000207029 4307 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp47Q8BY87 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp47Q8BY87 Gm42869-201ENSMUST00000199953 2121 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 Gm44171-201ENSMUST00000203701 2109 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 Gm37485-201ENSMUST00000192326 2953 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC7.06□□□□□ -1.28
Usp47Q8BY87 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp47Q8BY87 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp47Q8BY87 Gm9408-201ENSMUST00000197375 1505 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Usp47Q8BY87 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm26376-201ENSMUST00000104784 110 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm8145-201ENSMUST00000118220 745 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm14352-201ENSMUST00000119250 449 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm24371-201ENSMUST00000122662 267 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm16259-201ENSMUST00000145241 553 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm9569-201ENSMUST00000187492 787 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm18426-201ENSMUST00000191874 973 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm34224-201ENSMUST00000204606 364 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Gm46369-201ENSMUST00000221577 401 ntBASIC7.05□□□□□ -1.28
Usp47Q8BY87 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Usp47Q8BY87 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 AC153532.3-201ENSMUST00000218660 3848 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 AC131586.2-202ENSMUST00000227016 2705 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm43462-201ENSMUST00000200265 3648 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm24117-201ENSMUST00000103973 133 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm11409-201ENSMUST00000118621 403 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms