Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nup54Q8BTS4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup54Q8BTS4 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm11486-201ENSMUST00000107322 478 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm14560-201ENSMUST00000118672 375 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm14175-201ENSMUST00000119835 241 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm23837-201ENSMUST00000122656 286 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm6542-201ENSMUST00000153606 772 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm22725-201ENSMUST00000158092 110 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Mir7012-201ENSMUST00000183900 64 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm18698-201ENSMUST00000192327 668 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm37490-201ENSMUST00000195566 724 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm43655-201ENSMUST00000197367 222 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm2011-203ENSMUST00000203750 435 ntBASIC5.29□□□□□ -1.56
Nup54Q8BTS4 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup54Q8BTS4 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm25595-201ENSMUST00000102273 97 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm14086-201ENSMUST00000117152 173 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm12808-201ENSMUST00000120597 404 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm13440-201ENSMUST00000121665 496 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm22730-201ENSMUST00000158085 171 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm22530-201ENSMUST00000158820 118 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm27820-201ENSMUST00000183628 175 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm37676-201ENSMUST00000195496 507 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm43408-201ENSMUST00000198263 440 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Olfr151-202ENSMUST00000221099 929 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup54Q8BTS4 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup54Q8BTS4 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms