Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25057-201ENSMUST00000157366 88 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm23205-201ENSMUST00000158671 103 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm6395-201ENSMUST00000167639 691 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm9613-201ENSMUST00000171662 196 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm27602-201ENSMUST00000183861 111 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm42799-201ENSMUST00000201331 328 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm44163-201ENSMUST00000205140 475 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm44718-201ENSMUST00000206886 359 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm5928-201ENSMUST00000221839 466 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm21731-201ENSMUST00000079524 489 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Gm24917-201ENSMUST00000083935 104 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sh3rf1Q69ZI1 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm12193-201ENSMUST00000117250 379 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm11462-201ENSMUST00000117749 562 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm15019-201ENSMUST00000120148 434 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm25667-201ENSMUST00000157701 275 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm5929-201ENSMUST00000166883 487 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm20648-201ENSMUST00000175815 328 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm24465-201ENSMUST00000178398 107 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm24969-201ENSMUST00000180331 79 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm27522-201ENSMUST00000183949 230 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm8454-201ENSMUST00000196980 811 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Mir6375-201ENSMUST00000197176 95 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm44472-201ENSMUST00000204922 943 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Cma2-202ENSMUST00000228263 857 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Mir3068-201ENSMUST00000083004 136 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms