Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Clcn1Q64347 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Clcn1Q64347 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Clcn1Q64347 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Clcn1Q64347 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Clcn1Q64347 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Clcn1Q64347 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.41□□□□□ -1.06
Clcn1Q64347 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clcn1Q64347 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clcn1Q64347 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clcn1Q64347 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Clcn1Q64347 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm18879-201ENSMUST00000221187 1537 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clcn1Q64347 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Mir759-201ENSMUST00000103254 98 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm11105-201ENSMUST00000112781 478 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm6446-201ENSMUST00000120604 818 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm24910-201ENSMUST00000157289 272 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm26346-201ENSMUST00000157525 329 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm21772-201ENSMUST00000169213 478 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm17126-201ENSMUST00000172276 523 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Mir5110-201ENSMUST00000175537 87 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm27152-201ENSMUST00000183828 99 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm36998-201ENSMUST00000193205 704 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm5322-201ENSMUST00000206142 699 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm4501-201ENSMUST00000207330 551 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm4528-201ENSMUST00000207905 551 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm19033-201ENSMUST00000208516 964 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm2099-201ENSMUST00000220979 412 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 AC105407.1-201ENSMUST00000225684 614 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm43523-201ENSMUST00000197397 2878 ntBASIC8.4□□□□□ -1.06
Clcn1Q64347 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clcn1Q64347 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.4□□□□□ -1.06
Clcn1Q64347 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Clcn1Q64347 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Clcn1Q64347 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Clcn1Q64347 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Clcn1Q64347 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Clcn1Q64347 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Clcn1Q64347 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clcn1Q64347 AC162910.1-201ENSMUST00000221219 1723 ntBASIC8.4□□□□□ -1.07
Clcn1Q64347 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC8.4□□□□□ -1.07
Clcn1Q64347 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.4□□□□□ -1.07
Clcn1Q64347 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm38278-201ENSMUST00000194715 1365 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm22656-201ENSMUST00000104199 171 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Mir467h-201ENSMUST00000116759 121 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm13137-201ENSMUST00000118035 345 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm14238-201ENSMUST00000120227 323 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm17030-201ENSMUST00000167016 393 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm22655-201ENSMUST00000174949 96 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC8.39□□□□□ -1.07
Clcn1Q64347 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm8930-201ENSMUST00000201693 768 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm19237-201ENSMUST00000205036 1132 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 Gm45530-201ENSMUST00000211658 225 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 AC122905.2-201ENSMUST00000220325 269 ntBASIC8.39□□□□□ -1.07
Clcn1Q64347 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clcn1Q64347 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clcn1Q64347 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms