Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm14512-201ENSMUST00000117924 230 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm12704-201ENSMUST00000119789 464 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm17014-201ENSMUST00000120765 168 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm15388-201ENSMUST00000121578 726 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm15275-201ENSMUST00000154752 347 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm27468-201ENSMUST00000183577 106 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Mir6343-201ENSMUST00000183584 84 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Mir7087-201ENSMUST00000184840 70 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm29596-201ENSMUST00000185710 385 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm2147-201ENSMUST00000193588 639 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm44261-201ENSMUST00000203337 209 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Clec2j-201ENSMUST00000032517 515 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trafd1Q3UDK1 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Trafd1Q3UDK1 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.09□□□□□ -1.6
Trafd1Q3UDK1 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trafd1Q3UDK1 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm15428-201ENSMUST00000121352 333 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm12332-201ENSMUST00000121397 922 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm24371-201ENSMUST00000122662 267 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm26490-201ENSMUST00000157879 140 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm24860-201ENSMUST00000158457 276 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm18828-202ENSMUST00000181035 310 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm43712-201ENSMUST00000198020 291 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Gm26330-201ENSMUST00000082817 104 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trafd1Q3UDK1 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms