Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm15010-201ENSMUST00000117153 407 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm8501-201ENSMUST00000117684 432 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm16074-201ENSMUST00000119524 444 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm11481-201ENSMUST00000120069 255 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm11804-201ENSMUST00000121663 468 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm24734-201ENSMUST00000158860 262 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm8221-201ENSMUST00000178052 564 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm21638-201ENSMUST00000179473 836 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm29550-201ENSMUST00000185543 285 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm29259-201ENSMUST00000186396 694 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm28507-201ENSMUST00000189737 703 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm37265-201ENSMUST00000191698 885 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm38075-201ENSMUST00000191979 920 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm17893-201ENSMUST00000203017 770 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm29848-201ENSMUST00000203107 295 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm45874-201ENSMUST00000212423 346 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm19256-201ENSMUST00000218550 231 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm36262-201ENSMUST00000223274 499 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 CT025602.1-201ENSMUST00000227281 382 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm16335-201ENSMUST00000077495 309 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm24921-201ENSMUST00000083024 107 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Col8a1Q00780 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col8a1Q00780 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Lipe-203ENSMUST00000105177 1251 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm15108-201ENSMUST00000116160 803 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm14220-201ENSMUST00000118114 449 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm9078-201ENSMUST00000119126 617 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm11692-201ENSMUST00000122121 902 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm26489-201ENSMUST00000157880 264 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm24438-201ENSMUST00000157893 115 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms