Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Mir6963-201ENSMUST00000183535 71 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm27781-201ENSMUST00000185185 92 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm28941-201ENSMUST00000185536 1017 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm29664-201ENSMUST00000191125 463 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm42452-201ENSMUST00000199749 617 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm44412-201ENSMUST00000203018 294 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm4290-201ENSMUST00000206897 814 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm23796-201ENSMUST00000084011 160 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 AW046200-203ENSMUST00000211787 2479 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm13149-201ENSMUST00000122071 339 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Mir1903-201ENSMUST00000122574 80 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm26153-201ENSMUST00000157433 127 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 V1rg10-201ENSMUST00000183378 937 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm5511-201ENSMUST00000189380 802 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm37444-201ENSMUST00000193605 439 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm9057-201ENSMUST00000198791 296 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm32453-201ENSMUST00000204183 456 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm19921-201ENSMUST00000210505 703 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 AV026068-237ENSMUST00000226075 572 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm10705-201ENSMUST00000098980 461 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.48□□□□□ -1.69
Nkx3-1P97436 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.48□□□□□ -1.69
Nkx3-1P97436 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm26376-201ENSMUST00000104784 110 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm14831-201ENSMUST00000120253 409 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.47□□□□□ -1.69
Nkx3-1P97436 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm10087-201ENSMUST00000167650 330 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Gm8214-201ENSMUST00000172123 351 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.47□□□□□ -1.69
Nkx3-1P97436 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms