Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.64□□□□□ -1.51
NcanP55066 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.64□□□□□ -1.51
NcanP55066 Mir6905-201ENSMUST00000184228 70 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm37581-201ENSMUST00000192371 988 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm37966-201ENSMUST00000193122 326 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm37676-201ENSMUST00000195496 507 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.64□□□□□ -1.51
NcanP55066 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.64□□□□□ -1.51
NcanP55066 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.64□□□□□ -1.51
NcanP55066 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.64□□□□□ -1.51
NcanP55066 Gm45070-201ENSMUST00000208100 246 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm45651-201ENSMUST00000210857 335 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm19073-201ENSMUST00000219978 555 ntBASIC5.64□□□□□ -1.51
NcanP55066 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.64□□□□□ -1.51
NcanP55066 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.64□□□□□ -1.51
NcanP55066 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.64□□□□□ -1.51
NcanP55066 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.64□□□□□ -1.51
NcanP55066 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.64□□□□□ -1.51
NcanP55066 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NcanP55066 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NcanP55066 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NcanP55066 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
NcanP55066 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.64□□□□□ -1.51
NcanP55066 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.63□□□□□ -1.51
NcanP55066 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.63□□□□□ -1.51
NcanP55066 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.63□□□□□ -1.51
NcanP55066 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.63□□□□□ -1.51
NcanP55066 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.63□□□□□ -1.51
NcanP55066 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NcanP55066 Gm26075-201ENSMUST00000104062 121 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm12931-201ENSMUST00000117046 324 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm14107-201ENSMUST00000117774 330 ntBASIC5.63□□□□□ -1.51
NcanP55066 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.63□□□□□ -1.51
NcanP55066 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm15786-201ENSMUST00000121079 450 ntBASIC5.63□□□□□ -1.51
NcanP55066 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.63□□□□□ -1.51
NcanP55066 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Mir1945-201ENSMUST00000157919 78 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm24735-201ENSMUST00000158859 118 ntBASIC5.63□□□□□ -1.51
NcanP55066 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.63□□□□□ -1.51
NcanP55066 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm21856-201ENSMUST00000187547 696 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm8599-201ENSMUST00000193033 457 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.63□□□□□ -1.51
NcanP55066 Gm2623-201ENSMUST00000199229 286 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm43436-201ENSMUST00000199308 147 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm43930-201ENSMUST00000203868 845 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm7443-201ENSMUST00000206355 378 ntBASIC5.63□□□□□ -1.51
NcanP55066 Gm34272-201ENSMUST00000208886 253 ntBASIC5.63□□□□□ -1.51
NcanP55066 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
NcanP55066 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
NcanP55066 Gm11360-201ENSMUST00000221898 262 ntBASIC5.63□□□□□ -1.51
NcanP55066 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.63□□□□□ -1.51
NcanP55066 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.63□□□□□ -1.51
NcanP55066 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.63□□□□□ -1.51
NcanP55066 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
NcanP55066 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NcanP55066 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NcanP55066 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.63□□□□□ -1.51
NcanP55066 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.63□□□□□ -1.51
NcanP55066 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
NcanP55066 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NcanP55066 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
NcanP55066 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.62□□□□□ -1.51
NcanP55066 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NcanP55066 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NcanP55066 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms