Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Cux1P53564 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Gm6884-201ENSMUST00000119318 615 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Gm22343-201ENSMUST00000122648 286 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Mir1957b-201ENSMUST00000184608 123 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Gm27564-201ENSMUST00000185196 96 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Gm9317-201ENSMUST00000197055 862 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC7.72□□□□□ -1.17
Cux1P53564 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC7.72□□□□□ -1.17
Cux1P53564 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC7.72□□□□□ -1.17
Cux1P53564 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Cux1P53564 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cux1P53564 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.71□□□□□ -1.17
Cux1P53564 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cux1P53564 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cux1P53564 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cux1P53564 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Cux1P53564 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Cux1P53564 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Cux1P53564 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cux1P53564 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.71□□□□□ -1.17
Cux1P53564 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Gm13250-201ENSMUST00000117209 753 ntBASIC7.71□□□□□ -1.18
Cux1P53564 Gm14560-201ENSMUST00000118672 375 ntBASIC7.71□□□□□ -1.18
Cux1P53564 Gm16114-201ENSMUST00000161930 300 ntBASIC7.71□□□□□ -1.18
Cux1P53564 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Gm18802-201ENSMUST00000186270 888 ntBASIC7.71□□□□□ -1.18
Cux1P53564 Gm5252-201ENSMUST00000189030 909 ntBASIC7.71□□□□□ -1.18
Cux1P53564 Gm37670-201ENSMUST00000193622 229 ntBASIC7.71□□□□□ -1.18
Cux1P53564 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC7.71□□□□□ -1.18
Cux1P53564 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC7.71□□□□□ -1.18
Cux1P53564 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Cux1P53564 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Cux1P53564 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Cux1P53564 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Cux1P53564 Gm5746-201ENSMUST00000183550 2200 ntBASIC7.7□□□□□ -1.18
Cux1P53564 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC7.7□□□□□ -1.18
Cux1P53564 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.7□□□□□ -1.18
Cux1P53564 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Gm37916-201ENSMUST00000192153 2435 ntBASIC7.7□□□□□ -1.18
Cux1P53564 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC7.7□□□□□ -1.18
Cux1P53564 Gm15333-201ENSMUST00000118825 364 ntBASIC7.7□□□□□ -1.18
Cux1P53564 Gm16259-201ENSMUST00000145241 553 ntBASIC7.7□□□□□ -1.18
Cux1P53564 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Mir6975-201ENSMUST00000184879 61 ntBASIC7.7□□□□□ -1.18
Cux1P53564 Gm18177-201ENSMUST00000188373 404 ntBASIC7.7□□□□□ -1.18
Cux1P53564 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC7.7□□□□□ -1.18
Cux1P53564 AC136146.1-201ENSMUST00000196180 91 ntBASIC7.7□□□□□ -1.18
Cux1P53564 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC7.7□□□□□ -1.18
Cux1P53564 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC7.7□□□□□ -1.18
Cux1P53564 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
Cux1P53564 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Cux1P53564 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Cux1P53564 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Cux1P53564 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Cux1P53564 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Cux1P53564 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 AC121997.2-201ENSMUST00000228095 2294 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Cux1P53564 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC7.69□□□□□ -1.18
Cux1P53564 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Cux1P53564 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Cux1P53564 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 Gm12807-201ENSMUST00000121546 962 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Cux1P53564 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 Gm23465-201ENSMUST00000157134 262 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Gm26828-201ENSMUST00000180640 172 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Gm37878-201ENSMUST00000192108 387 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Gm8599-201ENSMUST00000193033 457 ntBASIC7.69□□□□□ -1.18
Cux1P53564 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 AC158523.2-201ENSMUST00000222708 548 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.69□□□□□ -1.18
Cux1P53564 AC162908.1-201ENSMUST00000219164 4563 ntBASIC7.69□□□□□ -1.18
Cux1P53564 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cux1P53564 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms