Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Rfx1P48377 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Rfx1P48377 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Rfx1P48377 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Gm45872-201ENSMUST00000209804 1584 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm15382-201ENSMUST00000118011 537 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm13579-201ENSMUST00000118519 517 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm7058-201ENSMUST00000119209 902 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm4234-201ENSMUST00000119747 714 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm14725-201ENSMUST00000120324 828 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm12929-201ENSMUST00000122406 370 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC7.3□□□□□ -1.24
Rfx1P48377 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Gm23894-201ENSMUST00000158107 313 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm25675-201ENSMUST00000174979 118 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm20690-201ENSMUST00000177341 315 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm27193-201ENSMUST00000184217 586 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Mir6362-201ENSMUST00000184329 107 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm29784-201ENSMUST00000196217 406 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm44361-201ENSMUST00000197960 94 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm43243-201ENSMUST00000199964 278 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm5306-201ENSMUST00000203325 757 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm44108-201ENSMUST00000203525 422 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm44254-201ENSMUST00000204184 322 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm44147-201ENSMUST00000204658 94 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm6261-201ENSMUST00000204707 760 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Gm2398-201ENSMUST00000218347 883 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Olfr790-204ENSMUST00000218901 1070 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.3□□□□□ -1.24
Rfx1P48377 AV026068-218ENSMUST00000223980 575 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Rfx1P48377 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Rfx1P48377 Gm15732-201ENSMUST00000079794 480 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Rfx1P48377 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Rfx1P48377 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Gm37769-201ENSMUST00000193753 2369 ntBASIC7.3□□□□□ -1.24
Rfx1P48377 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Rfx1P48377 AL670757.1-201ENSMUST00000223668 1959 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Rfx1P48377 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Rfx1P48377 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm26384-201ENSMUST00000102183 110 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm12573-201ENSMUST00000118158 286 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm11890-201ENSMUST00000119585 417 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.29□□□□□ -1.24
Rfx1P48377 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm25435-201ENSMUST00000158277 267 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm26271-201ENSMUST00000158349 104 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm6647-201ENSMUST00000170514 641 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.29□□□□□ -1.24
Rfx1P48377 Gm15257-201ENSMUST00000177680 883 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm15252-201ENSMUST00000177750 883 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm15260-201ENSMUST00000179402 883 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC7.29□□□□□ -1.24
Rfx1P48377 Mir6921-201ENSMUST00000183719 80 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm18802-201ENSMUST00000186270 888 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Gm18448-201ENSMUST00000186286 599 ntBASIC7.29□□□□□ -1.24
Rfx1P48377 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Rfx1P48377 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms