Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.13□□□□□ -1.59
HttP42859 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HttP42859 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Gm23837-201ENSMUST00000122656 286 ntBASIC5.13□□□□□ -1.59
HttP42859 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.13□□□□□ -1.59
HttP42859 Gm27033-201ENSMUST00000183226 544 ntBASIC5.13□□□□□ -1.59
HttP42859 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.13□□□□□ -1.59
HttP42859 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.13□□□□□ -1.59
HttP42859 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.13□□□□□ -1.59
HttP42859 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HttP42859 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.13□□□□□ -1.59
HttP42859 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.13□□□□□ -1.59
HttP42859 Gm16107-201ENSMUST00000162523 862 ntBASIC5.13□□□□□ -1.59
HttP42859 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HttP42859 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.13□□□□□ -1.59
HttP42859 Gm44214-201ENSMUST00000204153 606 ntBASIC5.13□□□□□ -1.59
HttP42859 Gm17780-201ENSMUST00000207142 612 ntBASIC5.13□□□□□ -1.59
HttP42859 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Gm4036-201ENSMUST00000220842 626 ntBASIC5.13□□□□□ -1.59
HttP42859 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HttP42859 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HttP42859 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HttP42859 Gm23175-201ENSMUST00000104371 132 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm24224-201ENSMUST00000158828 258 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm24735-201ENSMUST00000158859 118 ntBASIC5.12□□□□□ -1.59
HttP42859 Mir6408-201ENSMUST00000183643 91 ntBASIC5.12□□□□□ -1.59
HttP42859 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm42830-201ENSMUST00000196642 313 ntBASIC5.12□□□□□ -1.59
HttP42859 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HttP42859 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HttP42859 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.12□□□□□ -1.59
HttP42859 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HttP42859 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC5.12□□□□□ -1.59
HttP42859 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HttP42859 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.12□□□□□ -1.59
HttP42859 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.12□□□□□ -1.59
HttP42859 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
HttP42859 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HttP42859 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm23638-201ENSMUST00000175073 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm23158-201ENSMUST00000175076 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm22907-201ENSMUST00000175198 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm22625-201ENSMUST00000175382 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm22875-201ENSMUST00000175449 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm25197-201ENSMUST00000175516 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm27857-201ENSMUST00000176930 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm26268-201ENSMUST00000177685 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm23681-201ENSMUST00000178821 126 ntBASIC5.12□□□□□ -1.59
HttP42859 Mir6993-201ENSMUST00000184912 65 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm38150-201ENSMUST00000192996 452 ntBASIC5.12□□□□□ -1.59
HttP42859 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Gm44054-201ENSMUST00000203814 372 ntBASIC5.12□□□□□ -1.59
HttP42859 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm9309-201ENSMUST00000223537 546 ntBASIC5.12□□□□□ -1.59
HttP42859 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.12□□□□□ -1.59
HttP42859 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Naip3-201ENSMUST00000118082 4208 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.12□□□□□ -1.59
HttP42859 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.12□□□□□ -1.59
HttP42859 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HttP42859 Gm14000-201ENSMUST00000118670 233 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm12413-201ENSMUST00000121508 312 ntBASIC5.12□□□□□ -1.59
HttP42859 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.12□□□□□ -1.59
HttP42859 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Gm24314-201ENSMUST00000158274 123 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm24175-201ENSMUST00000158931 129 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm17152-201ENSMUST00000172430 535 ntBASIC5.12□□□□□ -1.59
HttP42859 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.12□□□□□ -1.59
HttP42859 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.12□□□□□ -1.59
HttP42859 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.12□□□□□ -1.59
HttP42859 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HttP42859 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HttP42859 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.12□□□□□ -1.59
HttP42859 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HttP42859 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms