Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 AC101205.1-201ENSMUST00000227916 907 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sdc1P18828 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Sdc1P18828 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.15□□□□□ -1.75
Sdc1P18828 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sdc1P18828 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sdc1P18828 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm11908-201ENSMUST00000117755 347 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm11517-201ENSMUST00000119491 387 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm12369-201ENSMUST00000121343 942 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm24690-201ENSMUST00000157759 97 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Scarna13-201ENSMUST00000158164 275 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm24675-201ENSMUST00000158757 259 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm25065-201ENSMUST00000177914 132 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm25891-201ENSMUST00000180050 132 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm28118-201ENSMUST00000185957 294 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Scgb2b33-201ENSMUST00000187413 334 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm28389-201ENSMUST00000190090 697 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm20770-201ENSMUST00000193474 694 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm37270-201ENSMUST00000194277 330 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.14□□□□□ -1.75
Sdc1P18828 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm19761-201ENSMUST00000205372 391 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm44523-201ENSMUST00000205616 417 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm3213-201ENSMUST00000219296 441 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 AC155834.1-201ENSMUST00000220033 498 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm5457-201ENSMUST00000022260 333 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Thoc7-209ENSMUST00000225325 765 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 AC115735.5-201ENSMUST00000228386 397 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sdc1P18828 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.14□□□□□ -1.75
Sdc1P18828 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.14□□□□□ -1.75
Sdc1P18828 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sdc1P18828 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sdc1P18828 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm23768-201ENSMUST00000104440 131 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm11486-201ENSMUST00000107322 478 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.13□□□□□ -1.75
Sdc1P18828 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm7146-201ENSMUST00000116079 739 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm12760-201ENSMUST00000117861 482 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm12438-201ENSMUST00000122034 336 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm26489-201ENSMUST00000157880 264 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm23965-201ENSMUST00000157969 142 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sdc1P18828 Gm26925-201ENSMUST00000182470 957 ntBASIC4.13□□□□□ -1.75
Sdc1P18828 Gm27030-201ENSMUST00000182551 464 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms