Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm22395-201ENSMUST00000177427 96 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Mir6907-201ENSMUST00000183764 71 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Gm29196-201ENSMUST00000189239 618 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col1a1P11087 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm22493-201ENSMUST00000104494 132 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm11486-201ENSMUST00000107322 478 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm6062-201ENSMUST00000120462 631 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm4854-201ENSMUST00000185902 574 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm19206-201ENSMUST00000186401 827 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm37961-201ENSMUST00000192729 299 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.92□□□□□ -1.46
Col1a1P11087 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col1a1P11087 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.92□□□□□ -1.46
Col1a1P11087 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col1a1P11087 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col1a1P11087 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col1a1P11087 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Col1a1P11087 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm23837-201ENSMUST00000122656 286 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm22804-201ENSMUST00000158052 101 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm23069-201ENSMUST00000158240 311 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Gm2147-201ENSMUST00000193588 639 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm37908-201ENSMUST00000195828 470 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.91□□□□□ -1.46
Col1a1P11087 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Col1a1P11087 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Col1a1P11087 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col1a1P11087 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col1a1P11087 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col1a1P11087 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.91□□□□□ -1.46
Col1a1P11087 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.9□□□□□ -1.46
Col1a1P11087 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm25726-201ENSMUST00000104529 129 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 Gm14086-201ENSMUST00000117152 173 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.9□□□□□ -1.46
Col1a1P11087 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.9□□□□□ -1.46
Col1a1P11087 Gm5252-201ENSMUST00000189030 909 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms