Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Gm37779-201ENSMUST00000194221 3380 ntBASIC9.29□□□□□ -0.92
Ccdc180J3QNE4 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm44144-201ENSMUST00000203683 1960 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm24469-201ENSMUST00000104487 131 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm14388-201ENSMUST00000118119 477 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm8145-201ENSMUST00000118220 745 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm27688-201ENSMUST00000183634 91 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm27387-201ENSMUST00000184583 116 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 AC154484.2-201ENSMUST00000228359 818 ntBASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccdc180J3QNE4 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm26300-201ENSMUST00000102282 94 ntBASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm19617-201ENSMUST00000202977 308 ntBASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm24031-201ENSMUST00000083930 131 ntBASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 AC126439.1-201ENSMUST00000226772 2104 ntBASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Ccdc180J3QNE4 Gm11486-201ENSMUST00000107322 478 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm16082-201ENSMUST00000115992 377 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm20954-201ENSMUST00000189078 644 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm19096-201ENSMUST00000209705 766 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm29112-201ENSMUST00000188962 3487 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm44751-201ENSMUST00000208302 4387 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm43528-201ENSMUST00000199492 1674 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm23193-201ENSMUST00000102427 82 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm9655-201ENSMUST00000211321 1284 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Gm6503-201ENSMUST00000210829 2225 ntBASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ccdc180J3QNE4 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm42876-201ENSMUST00000196989 3215 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm12520-201ENSMUST00000117493 316 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm13503-201ENSMUST00000119017 446 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm15905-201ENSMUST00000137042 298 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm16250-201ENSMUST00000148974 256 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm23925-202ENSMUST00000188429 132 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 CT030242.3-201ENSMUST00000221231 581 ntBASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Ccdc180J3QNE4 Gm43784-201ENSMUST00000202922 2436 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gm45183-201ENSMUST00000207937 1497 ntBASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ccdc180J3QNE4 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms