Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.96□□□□□ -1.62
Upk3aQ9JKX8 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm23274-201ENSMUST00000104056 130 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Mir1188-201ENSMUST00000116756 120 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm14711-201ENSMUST00000117056 217 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm13890-201ENSMUST00000117578 390 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm16149-201ENSMUST00000117631 309 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm14610-201ENSMUST00000118358 966 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm23115-201ENSMUST00000158480 108 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm16456-201ENSMUST00000174431 920 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm27468-201ENSMUST00000183577 106 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm29201-201ENSMUST00000189120 431 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm37700-201ENSMUST00000192617 965 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm44277-201ENSMUST00000205128 649 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm5418-201ENSMUST00000206932 528 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm45660-201ENSMUST00000210267 151 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm26226-201ENSMUST00000082509 116 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm26330-201ENSMUST00000082817 104 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
Upk3aQ9JKX8 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm25418-201ENSMUST00000104214 129 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm24685-201ENSMUST00000157764 285 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Mir3110-201ENSMUST00000175053 80 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm21139-201ENSMUST00000186594 877 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm29454-201ENSMUST00000190805 393 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm44795-201ENSMUST00000205496 319 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Zfp429-203ENSMUST00000224684 524 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Mir337-201ENSMUST00000083592 97 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upk3aQ9JKX8 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms