Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm9332-201ENSMUST00000198431 730 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm44261-201ENSMUST00000203337 209 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm45874-201ENSMUST00000212423 346 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm2645-201ENSMUST00000223516 547 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.97□□□□□ -1.61
Lima1Q9ERG0 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Lima1Q9ERG0 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.96□□□□□ -1.61
Lima1Q9ERG0 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Lima1Q9ERG0 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.96□□□□□ -1.61
Lima1Q9ERG0 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Lima1Q9ERG0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Lima1Q9ERG0 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm24350-201ENSMUST00000104163 133 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm13690-201ENSMUST00000118989 285 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm12074-201ENSMUST00000120189 219 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm12007-201ENSMUST00000120978 597 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm11677-201ENSMUST00000121349 977 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm8061-201ENSMUST00000122380 350 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm22958-201ENSMUST00000122512 184 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm23837-201ENSMUST00000122656 286 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm23225-201ENSMUST00000158121 114 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm27225-201ENSMUST00000183833 557 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm28353-201ENSMUST00000186482 570 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm28533-201ENSMUST00000186741 570 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm26330-201ENSMUST00000082817 104 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm25139-201ENSMUST00000083247 210 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Lima1Q9ERG0 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Gm11975-201ENSMUST00000118772 481 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Mup-ps16-201ENSMUST00000120085 596 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Gm13533-201ENSMUST00000121104 177 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Gm24395-201ENSMUST00000158139 125 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Gm24295-201ENSMUST00000158298 131 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Gm22361-201ENSMUST00000158435 176 ntBASIC4.95□□□□□ -1.62
Lima1Q9ERG0 Gm8256-201ENSMUST00000169178 453 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms