Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm6366-201ENSMUST00000198766 826 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm19880-201ENSMUST00000207731 318 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm19189-201ENSMUST00000221689 754 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm272-201ENSMUST00000222073 919 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm22807-201ENSMUST00000082737 129 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.92□□□□□ -1.46
Smc1aQ9CU62 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm13077-201ENSMUST00000121941 484 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm23537-201ENSMUST00000157536 330 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm3170-201ENSMUST00000168753 850 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm3348-201ENSMUST00000177813 850 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm3257-201ENSMUST00000207217 675 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm45660-201ENSMUST00000210267 151 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Zfp429-203ENSMUST00000224684 524 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm23623-201ENSMUST00000082461 107 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Mir31-201ENSMUST00000083474 106 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Smc1aQ9CU62 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm11200-201ENSMUST00000121698 448 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm25430-201ENSMUST00000157614 289 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm23965-201ENSMUST00000157969 142 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm10319-202ENSMUST00000159439 846 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm37030-201ENSMUST00000194254 295 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm37659-201ENSMUST00000194574 111 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm33952-201ENSMUST00000197795 408 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Clec2j-202ENSMUST00000203658 606 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Mir449a-201ENSMUST00000083641 91 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Gm25187-201ENSMUST00000083906 133 ntBASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Smc1aQ9CU62 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms