Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm45249-201ENSMUST00000211021 348 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm19169-201ENSMUST00000220109 1246 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm7117-201ENSMUST00000071515 387 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm13367-201ENSMUST00000119955 796 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm7973-201ENSMUST00000122107 488 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm38166-201ENSMUST00000191660 471 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm38011-201ENSMUST00000193312 279 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm2147-201ENSMUST00000193588 639 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm10064-201ENSMUST00000071235 399 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Use1Q9CQ56 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm11821-201ENSMUST00000117335 979 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm15531-201ENSMUST00000118062 252 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm11781-201ENSMUST00000118328 472 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm13755-201ENSMUST00000118509 305 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm12936-201ENSMUST00000121439 301 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm22210-201ENSMUST00000158101 144 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm22518-201ENSMUST00000158267 68 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm27024-201ENSMUST00000182561 755 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm5285-201ENSMUST00000193089 666 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm38384-201ENSMUST00000195413 1122 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm45750-201ENSMUST00000211966 354 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Use1Q9CQ56 Snora44-201ENSMUST00000082670 129 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm25260-201ENSMUST00000083053 134 ntBASIC4.84□□□□□ -1.63
Use1Q9CQ56 Gm25139-201ENSMUST00000083247 210 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms