Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm22267-201ENSMUST00000104008 131 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm25564-201ENSMUST00000104604 132 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm2348-201ENSMUST00000108782 300 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm25111-201ENSMUST00000116686 147 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm8692-201ENSMUST00000118102 438 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm7916-201ENSMUST00000120325 456 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm12101-201ENSMUST00000121590 390 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 n-R5s207-201ENSMUST00000122497 118 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm22434-201ENSMUST00000158549 122 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Mir7685-201ENSMUST00000183555 62 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm29605-201ENSMUST00000190800 292 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm32158-201ENSMUST00000200135 404 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm44252-201ENSMUST00000204187 330 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 AC073947.3-201ENSMUST00000215576 766 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm9845-201ENSMUST00000056409 598 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm24921-201ENSMUST00000083024 107 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim11Q99PQ2 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm25877-201ENSMUST00000104326 129 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm11799-201ENSMUST00000116110 460 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm14173-201ENSMUST00000117690 278 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm15060-201ENSMUST00000119550 948 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm12307-201ENSMUST00000120581 590 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm14574-201ENSMUST00000120644 279 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm14600-201ENSMUST00000121032 630 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm11321-201ENSMUST00000121257 902 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm13743-201ENSMUST00000121486 724 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm23435-201ENSMUST00000157183 156 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm22915-201ENSMUST00000157615 136 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Mir6341-201ENSMUST00000183490 121 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm29259-201ENSMUST00000186396 694 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm18805-201ENSMUST00000206872 655 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm44754-201ENSMUST00000208155 400 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm44892-201ENSMUST00000208595 488 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC152951.1-201ENSMUST00000218907 266 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC122295.1-201ENSMUST00000223476 388 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC107369.1-201ENSMUST00000227373 860 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim11Q99PQ2 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.1□□□□□ -1.27
Trim11Q99PQ2 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms