Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cstf1Q99LC2 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm12237-201ENSMUST00000120158 470 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm26170-201ENSMUST00000158419 148 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm3531-201ENSMUST00000162698 489 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm4832-201ENSMUST00000182679 399 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm37581-201ENSMUST00000192371 988 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm18255-201ENSMUST00000211316 765 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm46191-201ENSMUST00000218899 433 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Olfr151-202ENSMUST00000221099 929 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm23508-201ENSMUST00000083079 72 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cstf1Q99LC2 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm15297-201ENSMUST00000117795 290 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm12322-201ENSMUST00000121605 389 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm21959-201ENSMUST00000178439 452 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Cstf1Q99LC2 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms