Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm22273-201ENSMUST00000104040 132 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm11908-201ENSMUST00000117755 347 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm2288-201ENSMUST00000118560 638 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm6175-201ENSMUST00000121351 400 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm7309-201ENSMUST00000121670 581 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm13738-201ENSMUST00000122437 469 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm26371-201ENSMUST00000157829 104 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm15838-201ENSMUST00000161575 180 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm28507-201ENSMUST00000189737 703 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm37336-202ENSMUST00000193705 468 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm38154-201ENSMUST00000195444 340 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm43295-201ENSMUST00000201439 412 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm35648-201ENSMUST00000202304 475 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm43090-201ENSMUST00000202459 314 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 AV026068-231ENSMUST00000225862 482 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Gm25099-201ENSMUST00000093716 116 ntBASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Vps53Q8CCB4 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Vps53Q8CCB4 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.4□□□□□ -1.39
Vps53Q8CCB4 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Vps53Q8CCB4 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.4□□□□□ -1.39
Vps53Q8CCB4 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Vps53Q8CCB4 Gm37180-201ENSMUST00000195335 2819 ntBASIC6.4□□□□□ -1.39
Vps53Q8CCB4 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
Vps53Q8CCB4 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm24265-201ENSMUST00000101833 141 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm9429-201ENSMUST00000117804 868 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm12074-201ENSMUST00000120189 219 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm13488-201ENSMUST00000120419 179 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm5405-201ENSMUST00000120478 609 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm14732-201ENSMUST00000121372 545 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm26487-201ENSMUST00000158022 94 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm22160-201ENSMUST00000158405 328 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm23777-201ENSMUST00000158994 259 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm22122-201ENSMUST00000175147 200 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm23806-201ENSMUST00000175157 109 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm23872-201ENSMUST00000175432 77 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm24407-201ENSMUST00000177864 141 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm27039-201ENSMUST00000182438 962 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm20574-201ENSMUST00000182867 917 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Mir6539-201ENSMUST00000183732 110 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm38214-201ENSMUST00000192581 988 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm37993-201ENSMUST00000195301 988 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm42437-201ENSMUST00000197263 923 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm29815-201ENSMUST00000202418 178 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm43895-201ENSMUST00000203219 855 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm7825-201ENSMUST00000204046 416 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm44184-201ENSMUST00000204290 132 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Vps53Q8CCB4 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms