Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm12245-201ENSMUST00000117266 357 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm13890-201ENSMUST00000117578 390 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm12704-201ENSMUST00000119789 464 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm14175-201ENSMUST00000119835 241 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm15275-201ENSMUST00000154752 347 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Mir3473a-201ENSMUST00000175011 78 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm18802-201ENSMUST00000186270 888 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm28097-201ENSMUST00000187333 366 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm2497-201ENSMUST00000189539 601 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm44456-201ENSMUST00000196554 89 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm2011-203ENSMUST00000203750 435 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm40692-201ENSMUST00000220411 491 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm22741-201ENSMUST00000083438 165 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6.1□□□□□ -1.43
Atg4aQ8C9S8 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm43312-201ENSMUST00000201655 2466 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm12931-201ENSMUST00000117046 324 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm16394-201ENSMUST00000117289 675 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm11409-201ENSMUST00000118621 403 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm11790-201ENSMUST00000119569 455 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm16112-201ENSMUST00000159075 382 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm4322-201ENSMUST00000191094 336 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm7825-201ENSMUST00000204046 416 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 AC132384.6-201ENSMUST00000218976 1206 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.09□□□□□ -1.43
Atg4aQ8C9S8 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Atg4aQ8C9S8 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
Atg4aQ8C9S8 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms