Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm37444-201ENSMUST00000193605 439 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm8861-201ENSMUST00000196346 832 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm8891-201ENSMUST00000198546 832 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm42781-201ENSMUST00000201317 2719 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm16149-201ENSMUST00000117631 309 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm24905-201ENSMUST00000158129 104 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm6673-201ENSMUST00000166114 700 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm37272-201ENSMUST00000193401 488 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Gm2645-201ENSMUST00000223516 547 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a6Q8C6K9 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm25913-201ENSMUST00000157617 135 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm28957-201ENSMUST00000190174 373 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm10540-201ENSMUST00000097581 276 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 AC156636.1-201ENSMUST00000218639 2229 ntBASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col6a6Q8C6K9 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm25726-201ENSMUST00000104529 129 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm6632-201ENSMUST00000168425 954 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Mir6412-201ENSMUST00000184477 97 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm27564-201ENSMUST00000185196 96 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm4854-201ENSMUST00000185902 574 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm37088-201ENSMUST00000193887 406 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm43370-201ENSMUST00000196437 284 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm43436-201ENSMUST00000199308 147 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.53□□□□□ -1.68
Col6a6Q8C6K9 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms