Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm43892-201ENSMUST00000204373 265 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm12582-201ENSMUST00000030555 697 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm43319-201ENSMUST00000198036 2270 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm7919-201ENSMUST00000202043 1389 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm14513-201ENSMUST00000117403 123 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm13835-201ENSMUST00000118459 685 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm11813-201ENSMUST00000118586 291 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm14159-201ENSMUST00000119832 451 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm14614-201ENSMUST00000119873 384 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm12181-201ENSMUST00000121448 531 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm23259-201ENSMUST00000158318 303 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm26381-201ENSMUST00000174895 92 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm24757-201ENSMUST00000176987 371 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Mir6911-201ENSMUST00000184241 69 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm27601-201ENSMUST00000184794 127 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm5734-201ENSMUST00000189787 913 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm37719-201ENSMUST00000194615 292 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm44468-201ENSMUST00000199516 105 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm8930-201ENSMUST00000201693 768 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm19237-201ENSMUST00000205036 1132 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm44853-201ENSMUST00000209070 250 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm19154-201ENSMUST00000223330 940 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 AC121978.1-201ENSMUST00000228357 380 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim47Q8C0E3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Trim47Q8C0E3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trim47Q8C0E3 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm23692-201ENSMUST00000101881 160 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm25565-201ENSMUST00000104605 105 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm13455-201ENSMUST00000118767 517 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm15181-201ENSMUST00000120142 177 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm14238-201ENSMUST00000120227 323 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm11252-201ENSMUST00000120572 939 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm14796-201ENSMUST00000121216 959 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm11609-201ENSMUST00000121926 793 ntBASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC7.33□□□□□ -1.24
Trim47Q8C0E3 Gm24737-201ENSMUST00000158861 100 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms