Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trafd1Q3UDK1 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm24350-201ENSMUST00000104163 133 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm14175-201ENSMUST00000119835 241 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm15791-201ENSMUST00000120365 319 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm12808-201ENSMUST00000120597 404 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm12422-201ENSMUST00000121431 302 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm14587-201ENSMUST00000121714 658 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm23837-201ENSMUST00000122656 286 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm25290-201ENSMUST00000122796 144 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm5699-201ENSMUST00000152491 723 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm16112-201ENSMUST00000159075 382 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm2645-201ENSMUST00000223516 547 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm25139-201ENSMUST00000083247 210 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Mir449a-201ENSMUST00000083641 91 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.11□□□□□ -1.59
Trafd1Q3UDK1 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm14769-201ENSMUST00000118590 432 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm6461-201ENSMUST00000120015 633 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm13007-201ENSMUST00000121866 365 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm23318-201ENSMUST00000158000 108 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm8256-201ENSMUST00000169178 453 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm18953-201ENSMUST00000175694 300 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Mir7006-201ENSMUST00000183624 69 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm10048-201ENSMUST00000194196 372 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm9057-201ENSMUST00000198791 296 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm40692-201ENSMUST00000220411 491 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Gm10705-201ENSMUST00000098980 461 ntBASIC5.1□□□□□ -1.59
Trafd1Q3UDK1 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms