Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm11486-201ENSMUST00000107322 478 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm12641-201ENSMUST00000117874 985 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm12704-201ENSMUST00000119789 464 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm24944-201ENSMUST00000158330 128 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm27818-201ENSMUST00000184536 159 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm20770-201ENSMUST00000193474 694 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm42522-201ENSMUST00000196071 255 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm43554-201ENSMUST00000199987 186 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm8319-201ENSMUST00000205708 641 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm6776-201ENSMUST00000057752 900 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim43aQ3TL54 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm25919-201ENSMUST00000104271 132 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm13890-201ENSMUST00000117578 390 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm13451-201ENSMUST00000117649 592 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm14520-201ENSMUST00000119258 387 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm26490-201ENSMUST00000157879 140 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm4134-201ENSMUST00000173244 563 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm26993-201ENSMUST00000182766 789 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm24949-201ENSMUST00000183609 215 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm2914-201ENSMUST00000186120 328 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm19104-201ENSMUST00000198392 679 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm4321-201ENSMUST00000200520 442 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm45157-201ENSMUST00000208729 401 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm2645-201ENSMUST00000223516 547 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.43□□□□□ -1.54
Trim43aQ3TL54 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm11984-201ENSMUST00000118142 766 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm16420-201ENSMUST00000120258 856 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm14619-201ENSMUST00000120480 168 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm23837-201ENSMUST00000122656 286 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm24216-201ENSMUST00000158259 117 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm21756-201ENSMUST00000178380 930 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm21405-201ENSMUST00000179024 930 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm27528-201ENSMUST00000183544 205 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm21191-201ENSMUST00000186484 930 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm29503-201ENSMUST00000191044 930 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm19231-201ENSMUST00000193212 830 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm43036-201ENSMUST00000200594 373 ntBASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim43aQ3TL54 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms