Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm18597-201ENSMUST00000209519 694 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 AC142273.1-201ENSMUST00000213723 673 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 AC121912.1-201ENSMUST00000227525 1201 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col17a1Q07563 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC8.21□□□□□ -1.09
Col17a1Q07563 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC8.21□□□□□ -1.1
Col17a1Q07563 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col17a1Q07563 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col17a1Q07563 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col17a1Q07563 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col17a1Q07563 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col17a1Q07563 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC8.21□□□□□ -1.1
Col17a1Q07563 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col17a1Q07563 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Col17a1Q07563 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col17a1Q07563 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm23594-201ENSMUST00000104307 134 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm14933-201ENSMUST00000118840 481 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm8051-201ENSMUST00000120464 466 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm23865-201ENSMUST00000157723 97 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm27845-201ENSMUST00000184479 114 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm18547-201ENSMUST00000192439 811 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm33626-201ENSMUST00000206790 828 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 CT571268.1-201ENSMUST00000222320 407 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm6162-201ENSMUST00000194870 2930 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm42998-201ENSMUST00000197053 2371 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm44434-201ENSMUST00000203918 3745 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.2□□□□□ -1.1
Col17a1Q07563 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC8.2□□□□□ -1.1
Col17a1Q07563 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col17a1Q07563 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm23954-201ENSMUST00000157213 353 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm43491-201ENSMUST00000197133 784 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm19572-201ENSMUST00000214326 338 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 AC183268.2-201ENSMUST00000214513 446 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 AC117949.2-201ENSMUST00000225900 584 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm22456-201ENSMUST00000082578 125 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Fam35a-206ENSMUST00000228626 3100 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col17a1Q07563 AC154677.1-201ENSMUST00000227636 2805 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm14854-201ENSMUST00000117758 841 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC8.19□□□□□ -1.1
Col17a1Q07563 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Desi2-202ENSMUST00000069568 1193 ntBASIC8.19□□□□□ -1.1
Col17a1Q07563 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col17a1Q07563 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col17a1Q07563 Gm44562-201ENSMUST00000207194 1347 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm12633-201ENSMUST00000117742 1705 ntBASIC8.18□□□□□ -1.1
Col17a1Q07563 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col17a1Q07563 Gm14245-201ENSMUST00000118939 1843 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms