Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx3-1P97436 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm11346-201ENSMUST00000118346 704 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm14125-202ENSMUST00000120921 756 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm5353-201ENSMUST00000139800 793 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm23534-201ENSMUST00000157539 97 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm25655-201ENSMUST00000158465 290 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm16125-201ENSMUST00000159003 339 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Mir7031-201ENSMUST00000183860 65 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm43524-201ENSMUST00000197278 298 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm42459-201ENSMUST00000199679 742 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm7721-201ENSMUST00000200446 546 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm44214-201ENSMUST00000204153 606 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm2607-201ENSMUST00000212389 627 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm23927-201ENSMUST00000082466 215 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm42676-201ENSMUST00000197609 2686 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.5□□□□□ -1.69
Nkx3-1P97436 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx3-1P97436 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm26300-201ENSMUST00000102282 94 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm23593-201ENSMUST00000104309 120 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm24855-201ENSMUST00000104848 97 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Nkx3-1P97436 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm7657-201ENSMUST00000118851 666 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm11699-201ENSMUST00000119016 401 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm13367-201ENSMUST00000119955 796 ntBASIC4.49□□□□□ -1.69
Nkx3-1P97436 Gm12110-201ENSMUST00000121601 579 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms