Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm43054-201ENSMUST00000199495 884 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm2691-201ENSMUST00000203205 901 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm8719-201ENSMUST00000203602 534 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm19880-201ENSMUST00000207731 318 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm45701-201ENSMUST00000212049 235 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdh11P55288 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdh11P55288 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.87□□□□□ -1.63
Cdh11P55288 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdh11P55288 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdh11P55288 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdh11P55288 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdh11P55288 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm13537-201ENSMUST00000120467 267 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm13430-201ENSMUST00000121366 288 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm24561-201ENSMUST00000175182 95 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Cdh11P55288 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm29474-201ENSMUST00000187688 379 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm18177-201ENSMUST00000188373 404 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm21742-201ENSMUST00000189352 548 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm28188-201ENSMUST00000190483 236 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm38018-201ENSMUST00000195651 540 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm6057-201ENSMUST00000195927 314 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm42522-201ENSMUST00000196071 255 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm18482-201ENSMUST00000202405 760 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm44003-201ENSMUST00000203024 490 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm43973-201ENSMUST00000203562 210 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdh11P55288 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm21089-201ENSMUST00000215843 325 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm7768-201ENSMUST00000222988 597 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdh11P55288 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Desi2-202ENSMUST00000069568 1193 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cdh11P55288 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.86□□□□□ -1.63
Cdh11P55288 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdh11P55288 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdh11P55288 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Cdh11P55288 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdh11P55288 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdh11P55288 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdh11P55288 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdh11P55288 Gm11433-201ENSMUST00000118318 228 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdh11P55288 Gm15741-201ENSMUST00000119401 754 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Gm15034-201ENSMUST00000120043 349 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Gm13259-201ENSMUST00000120792 456 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Gm13077-201ENSMUST00000121941 484 ntBASIC4.85□□□□□ -1.63
Cdh11P55288 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms