Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Cux1P53564 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Cux1P53564 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cux1P53564 Gm37767-201ENSMUST00000193239 1834 ntBASIC7.76□□□□□ -1.17
Cux1P53564 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Cux1P53564 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Cux1P53564 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Cux1P53564 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.75□□□□□ -1.17
Cux1P53564 Gm23171-201ENSMUST00000157159 264 ntBASIC7.75□□□□□ -1.17
Cux1P53564 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC7.75□□□□□ -1.17
Cux1P53564 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Gm11360-201ENSMUST00000221898 262 ntBASIC7.75□□□□□ -1.17
Cux1P53564 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Cux1P53564 Gm2099-202ENSMUST00000223310 3341 ntBASIC7.75□□□□□ -1.17
Cux1P53564 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cux1P53564 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 Gm11914-201ENSMUST00000117094 507 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Gm14878-201ENSMUST00000118167 293 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 Gm6647-201ENSMUST00000170514 641 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC7.74□□□□□ -1.17
Cux1P53564 Gm8891-201ENSMUST00000198546 832 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 AC132384.6-201ENSMUST00000218976 1206 ntBASIC7.74□□□□□ -1.17
Cux1P53564 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 CT573086.3-201ENSMUST00000228762 594 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Gm43281-201ENSMUST00000202522 2704 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Cux1P53564 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Gm44171-201ENSMUST00000203701 2109 ntBASIC7.74□□□□□ -1.17
Cux1P53564 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cux1P53564 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Gm14172-201ENSMUST00000118255 644 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm18128-201ENSMUST00000172625 511 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC7.73□□□□□ -1.17
Cux1P53564 Gm18537-201ENSMUST00000205709 989 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Cux1P53564 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cux1P53564 AC121870.1-201ENSMUST00000216279 4879 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.73□□□□□ -1.17
Cux1P53564 Gm12717-201ENSMUST00000118427 983 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm12583-201ENSMUST00000120677 853 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm12752-201ENSMUST00000121657 811 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm23906-201ENSMUST00000157573 128 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm23501-201ENSMUST00000157744 256 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm10087-201ENSMUST00000167650 330 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Mir7074-201ENSMUST00000183884 63 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Gm29138-201ENSMUST00000191444 348 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Gm10988-201ENSMUST00000209150 1088 ntBASIC7.73□□□□□ -1.17
Cux1P53564 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cux1P53564 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cux1P53564 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Cux1P53564 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cux1P53564 AC123705.3-201ENSMUST00000223531 2069 ntBASIC7.72□□□□□ -1.17
Cux1P53564 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms