Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm29159-201ENSMUST00000187969 379 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm29525-201ENSMUST00000189844 699 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm29523-201ENSMUST00000191415 699 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm37308-201ENSMUST00000194684 100 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm25135-201ENSMUST00000082648 143 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.02□□□□□ -1.45
Shmt1P50431 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Shmt1P50431 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Shmt1P50431 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Shmt1P50431 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Shmt1P50431 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.02□□□□□ -1.45
Shmt1P50431 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Shmt1P50431 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.02□□□□□ -1.45
Shmt1P50431 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Shmt1P50431 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Shmt1P50431 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Shmt1P50431 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Shmt1P50431 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Shmt1P50431 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm24230-201ENSMUST00000104313 129 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Shmt1P50431 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm25773-201ENSMUST00000116718 127 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm11984-201ENSMUST00000118142 766 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm12303-201ENSMUST00000119506 673 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm7079-201ENSMUST00000119726 171 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm14065-201ENSMUST00000120848 585 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm12936-201ENSMUST00000121439 301 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm24216-201ENSMUST00000158259 117 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm25489-201ENSMUST00000158727 141 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm3102-201ENSMUST00000164236 489 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm17064-201ENSMUST00000167690 452 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm2930-201ENSMUST00000170403 474 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm22392-201ENSMUST00000177971 107 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.01□□□□□ -1.45
Shmt1P50431 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm43489-201ENSMUST00000196810 993 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm43516-201ENSMUST00000196891 322 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm18215-201ENSMUST00000204429 798 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Gm8137-201ENSMUST00000218997 463 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC6.01□□□□□ -1.45
Shmt1P50431 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 CT009550.5-201ENSMUST00000226286 382 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Shmt1P50431 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6.01□□□□□ -1.45
Shmt1P50431 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Shmt1P50431 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Shmt1P50431 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Shmt1P50431 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Shmt1P50431 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Shmt1P50431 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Shmt1P50431 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Shmt1P50431 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Shmt1P50431 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Shmt1P50431 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.01□□□□□ -1.45
Shmt1P50431 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Shmt1P50431 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Shmt1P50431 Gm44742-201ENSMUST00000207190 1412 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms