Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rfx1P48377 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm43665-201ENSMUST00000198672 1659 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm25415-201ENSMUST00000104220 132 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm15076-201ENSMUST00000117076 474 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm8250-201ENSMUST00000117398 774 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm14173-201ENSMUST00000117690 278 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm16588-201ENSMUST00000162889 355 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm29545-201ENSMUST00000188878 694 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm18969-201ENSMUST00000189423 730 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm44075-201ENSMUST00000204208 216 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm46311-201ENSMUST00000217971 203 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Gm6906-201ENSMUST00000218014 569 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7.32□□□□□ -1.24
Rfx1P48377 AC115735.3-201ENSMUST00000227757 513 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.32□□□□□ -1.24
Rfx1P48377 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Rfx1P48377 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Rfx1P48377 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Rfx1P48377 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Rfx1P48377 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm16523-202ENSMUST00000203640 4750 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm25564-201ENSMUST00000104604 132 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm14050-201ENSMUST00000117052 346 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm13087-201ENSMUST00000118298 256 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm12540-201ENSMUST00000121938 319 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.31□□□□□ -1.24
Rfx1P48377 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm24065-201ENSMUST00000157487 264 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm3111-201ENSMUST00000167426 490 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm25942-201ENSMUST00000180080 110 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm37828-201ENSMUST00000192496 432 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm37501-201ENSMUST00000192830 691 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm37838-201ENSMUST00000194464 312 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm42622-201ENSMUST00000197229 355 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC7.31□□□□□ -1.24
Rfx1P48377 Gm4585-201ENSMUST00000207218 452 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm6850-201ENSMUST00000210031 530 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm19232-201ENSMUST00000211621 652 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Gm5457-201ENSMUST00000022260 333 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 AC107369.1-201ENSMUST00000227373 860 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Rfx1P48377 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Rfx1P48377 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.31□□□□□ -1.24
Rfx1P48377 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Rfx1P48377 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms