Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cdx2P43241 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cdx2P43241 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cdx2P43241 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.95□□□□□ -1.62
Cdx2P43241 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cdx2P43241 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Cdx2P43241 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.95□□□□□ -1.62
Cdx2P43241 Gm45311-201ENSMUST00000211086 1330 ntBASIC4.95□□□□□ -1.62
Cdx2P43241 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 AC153912.2-201ENSMUST00000215840 2015 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm25665-201ENSMUST00000157695 110 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm16285-201ENSMUST00000162999 347 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC4.94□□□□□ -1.62
Cdx2P43241 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Gm27875-201ENSMUST00000184425 123 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm5285-201ENSMUST00000193089 666 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Mir6516-201ENSMUST00000196236 110 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Gm42643-201ENSMUST00000200504 279 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Gm6719-201ENSMUST00000202067 335 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Gm29781-201ENSMUST00000203862 478 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm17915-201ENSMUST00000222077 548 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Cdx2P43241 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Cdx2P43241 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdx2P43241 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.94□□□□□ -1.62
Cdx2P43241 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Cdx2P43241 AC158779.2-201ENSMUST00000227902 1947 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Cdx2P43241 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm44242-201ENSMUST00000204212 2721 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm12007-201ENSMUST00000120978 597 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm6647-201ENSMUST00000170514 641 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm23925-202ENSMUST00000188429 132 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Gm29036-201ENSMUST00000189967 877 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Gm37581-201ENSMUST00000192371 988 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.93□□□□□ -1.62
Cdx2P43241 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm45628-201ENSMUST00000210849 274 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Gm18329-201ENSMUST00000215832 589 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.93□□□□□ -1.62
Cdx2P43241 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.93□□□□□ -1.62
Cdx2P43241 AC129597.1-201ENSMUST00000223046 1234 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Gm2645-201ENSMUST00000223516 547 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdx2P43241 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdx2P43241 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.93□□□□□ -1.62
Cdx2P43241 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cdx2P43241 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms