Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm24041-201ENSMUST00000083115 156 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm23502-201ENSMUST00000083902 145 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm11885-201ENSMUST00000118473 1428 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdx1P18111 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdx1P18111 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.36□□□□□ -1.71
Cdx1P18111 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm22194-201ENSMUST00000116869 95 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm13451-201ENSMUST00000117649 592 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm8129-201ENSMUST00000118230 213 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm14985-201ENSMUST00000118693 786 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm13245-201ENSMUST00000119646 260 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm14619-201ENSMUST00000120480 168 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm16179-201ENSMUST00000120685 373 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm8545-201ENSMUST00000120692 801 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm22514-201ENSMUST00000122547 308 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.35□□□□□ -1.71
Cdx1P18111 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm23669-201ENSMUST00000157470 128 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm23662-201ENSMUST00000158046 111 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm8993-201ENSMUST00000182182 983 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm28859-201ENSMUST00000186650 616 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm20770-201ENSMUST00000193474 694 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm37196-201ENSMUST00000194762 906 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm42652-201ENSMUST00000199073 614 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm43456-201ENSMUST00000202519 457 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm19182-201ENSMUST00000207139 577 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 AC132384.3-201ENSMUST00000219709 472 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.35□□□□□ -1.71
Cdx1P18111 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm2614-201ENSMUST00000223227 403 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm16335-201ENSMUST00000077495 309 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm23624-201ENSMUST00000082463 321 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdx1P18111 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdx1P18111 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.35□□□□□ -1.71
Cdx1P18111 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Cdx1P18111 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.35□□□□□ -1.71
Cdx1P18111 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cdx1P18111 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cdx1P18111 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Cdx1P18111 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms