Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22160-201ENSMUST00000158405 328 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col1a1P11087 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Gm16456-201ENSMUST00000174431 920 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Gm21816-201ENSMUST00000179255 360 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Mir6960-201ENSMUST00000183449 61 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Gm10292-202ENSMUST00000193165 585 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 Gm5750-201ENSMUST00000218711 801 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Smc5-206ENSMUST00000226111 3265 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm12423-201ENSMUST00000118334 135 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm13808-201ENSMUST00000121353 184 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm26350-201ENSMUST00000157531 288 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Zakit-201ENSMUST00000157677 308 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm23501-201ENSMUST00000157744 256 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm22569-201ENSMUST00000175545 124 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm8221-201ENSMUST00000178052 564 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm4842-201ENSMUST00000183237 835 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm27688-201ENSMUST00000183634 91 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm37878-201ENSMUST00000192108 387 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm37088-201ENSMUST00000193887 406 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm19739-201ENSMUST00000195941 153 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.95□□□□□ -1.46
Col1a1P11087 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Gm2059-201ENSMUST00000212025 287 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.95□□□□□ -1.46
Col1a1P11087 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.95□□□□□ -1.46
Col1a1P11087 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col1a1P11087 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col1a1P11087 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Col1a1P11087 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col1a1P11087 Gm13932-201ENSMUST00000120873 610 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm24175-201ENSMUST00000158931 129 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm22177-201ENSMUST00000175002 158 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Mir7222-201ENSMUST00000183740 75 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm27568-201ENSMUST00000184220 99 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.94□□□□□ -1.46
Col1a1P11087 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.94□□□□□ -1.46
Col1a1P11087 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.94□□□□□ -1.46
Col1a1P11087 Gm44138-201ENSMUST00000204939 271 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm19921-201ENSMUST00000210505 703 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 Gm9685-201ENSMUST00000211275 538 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.94□□□□□ -1.46
Col1a1P11087 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col1a1P11087 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Col1a1P11087 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col1a1P11087 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.93□□□□□ -1.46
Col1a1P11087 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col1a1P11087 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms