Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col4a6B1AVK5 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 AC124414.1-201ENSMUST00000218033 2946 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm14304-201ENSMUST00000117272 446 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm11584-201ENSMUST00000120636 325 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm13932-201ENSMUST00000120873 610 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm18128-201ENSMUST00000172625 511 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Mir7658-201ENSMUST00000184043 57 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm28957-201ENSMUST00000190174 373 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm37097-201ENSMUST00000193676 336 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm9317-201ENSMUST00000197055 862 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm8719-201ENSMUST00000203602 534 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.26□□□□□ -1.57
Col4a6B1AVK5 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm11914-201ENSMUST00000117094 507 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm9308-201ENSMUST00000119073 448 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm12583-201ENSMUST00000120677 853 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm23501-201ENSMUST00000157744 256 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm5558-201ENSMUST00000178933 495 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.25□□□□□ -1.57
Col4a6B1AVK5 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col4a6B1AVK5 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm16114-201ENSMUST00000161930 300 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm6647-201ENSMUST00000170514 641 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm23875-201ENSMUST00000083711 318 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col4a6B1AVK5 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms