Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm22778-201ENSMUST00000104090 128 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm11633-201ENSMUST00000118176 444 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm24369-201ENSMUST00000175387 96 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm27818-201ENSMUST00000184536 159 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm23925-202ENSMUST00000188429 132 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm43968-201ENSMUST00000203388 389 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm3816-201ENSMUST00000209803 433 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn3aA2ASI5 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm24931-201ENSMUST00000158324 107 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm16107-201ENSMUST00000162523 862 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm6647-201ENSMUST00000170514 641 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm44820-201ENSMUST00000207420 396 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm24855-201ENSMUST00000104848 97 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm12752-201ENSMUST00000121657 811 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm25271-201ENSMUST00000157273 290 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm23673-201ENSMUST00000157474 298 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm22119-201ENSMUST00000175594 99 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm27875-201ENSMUST00000184425 123 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm2522-201ENSMUST00000204280 322 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn3aA2ASI5 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm12988-201ENSMUST00000119054 478 ntBASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm12231-201ENSMUST00000119447 695 ntBASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Gm26098-201ENSMUST00000157247 288 ntBASIC5.59□□□□□ -1.51
Scn3aA2ASI5 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scn3aA2ASI5 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms