Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm11346-201ENSMUST00000118346 704 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm13172-201ENSMUST00000118685 256 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm16463-201ENSMUST00000120527 721 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Mir7056-201ENSMUST00000183776 59 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm32453-201ENSMUST00000204183 456 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm22220-201ENSMUST00000082671 149 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm11409-201ENSMUST00000118621 403 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm12820-201ENSMUST00000119233 342 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm12752-201ENSMUST00000121657 811 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm22343-201ENSMUST00000122648 286 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm24477-201ENSMUST00000157438 103 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm22917-201ENSMUST00000180116 110 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm11360-201ENSMUST00000221898 262 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm23626-201ENSMUST00000082458 133 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.24□□□□□ -1.57
Scn1aA2APX8 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Scn1aA2APX8 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm16089-201ENSMUST00000117679 336 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm12734-201ENSMUST00000120228 948 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm24931-201ENSMUST00000158324 107 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm26950-201ENSMUST00000182734 498 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm28769-201ENSMUST00000190176 615 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm10292-202ENSMUST00000193165 585 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm6719-201ENSMUST00000202067 335 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm29664-201ENSMUST00000191125 463 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm37961-201ENSMUST00000192729 299 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm43350-201ENSMUST00000196382 711 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm43794-201ENSMUST00000200971 692 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.23□□□□□ -1.57
Scn1aA2APX8 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1aA2APX8 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms