Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm4963-201ENSMUST00000072718 378 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Mir134-201ENSMUST00000083492 71 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 BC055308-201ENSMUST00000193380 2538 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdc40Q9DC48 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm12413-201ENSMUST00000121508 312 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm11200-201ENSMUST00000121698 448 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm26350-201ENSMUST00000157531 288 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm23537-201ENSMUST00000157536 330 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm25603-201ENSMUST00000158361 105 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm23799-201ENSMUST00000175559 120 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm29596-201ENSMUST00000185710 385 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm42824-201ENSMUST00000199361 247 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm42983-201ENSMUST00000199879 815 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm2011-203ENSMUST00000203750 435 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm44184-201ENSMUST00000204290 132 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm45215-201ENSMUST00000206407 395 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Zfp429-203ENSMUST00000224684 524 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.89□□□□□ -1.63
Cdc40Q9DC48 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm14716-201ENSMUST00000120138 718 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm12685-201ENSMUST00000121702 214 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm26238-201ENSMUST00000175538 117 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21241-201ENSMUST00000179551 934 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Mir6400-201ENSMUST00000184870 92 ntBASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdc40Q9DC48 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms