Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mir6971-201ENSMUST00000183497 63 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Gm19256-201ENSMUST00000218550 231 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Gm5750-201ENSMUST00000218711 801 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Gm24763-201ENSMUST00000083688 190 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp2aQ9DB34 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm22273-201ENSMUST00000104040 132 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm14175-201ENSMUST00000119835 241 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm21999-201ENSMUST00000165985 387 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm6632-201ENSMUST00000168425 954 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm27543-201ENSMUST00000183562 177 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Mir7020-201ENSMUST00000183787 70 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm28353-201ENSMUST00000186482 570 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm28533-201ENSMUST00000186741 570 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm18342-201ENSMUST00000186987 694 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm2427-201ENSMUST00000189121 881 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm10048-201ENSMUST00000194196 372 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm4321-201ENSMUST00000200520 442 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm18325-201ENSMUST00000203228 835 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Gm23514-201ENSMUST00000082827 130 ntBASIC5.34□□□□□ -1.55
Chmp2aQ9DB34 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Chmp2aQ9DB34 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
Chmp2aQ9DB34 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Chmp2aQ9DB34 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm23274-201ENSMUST00000104056 130 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm11486-201ENSMUST00000107322 478 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm14065-201ENSMUST00000120848 585 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm42459-201ENSMUST00000199679 742 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm44307-201ENSMUST00000204466 764 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm20368-201ENSMUST00000220716 301 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 Zfp429-203ENSMUST00000224684 524 ntBASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp2aQ9DB34 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms