Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm23430-201ENSMUST00000122490 314 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Mir3095-201ENSMUST00000175552 87 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm37203-201ENSMUST00000191618 385 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm42579-201ENSMUST00000200512 734 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm44132-201ENSMUST00000205142 151 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm7688-201ENSMUST00000212857 337 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm19095-201ENSMUST00000220533 730 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Mir20a-201ENSMUST00000083508 107 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.88□□□□□ -1.63
Use1Q9CQ56 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Use1Q9CQ56 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm5381-201ENSMUST00000117975 1250 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm15772-201ENSMUST00000118533 438 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm14655-201ENSMUST00000120124 578 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm25152-201ENSMUST00000157117 114 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm25907-201ENSMUST00000158486 125 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm25348-201ENSMUST00000158961 111 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm28871-201ENSMUST00000186191 687 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm28188-201ENSMUST00000190483 236 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm43015-201ENSMUST00000199087 565 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm4510-201ENSMUST00000218265 427 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.87□□□□□ -1.63
Use1Q9CQ56 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Use1Q9CQ56 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm14086-201ENSMUST00000117152 173 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm15421-202ENSMUST00000118224 399 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm14716-201ENSMUST00000120138 718 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Trbv10-201ENSMUST00000168322 289 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC4.86□□□□□ -1.63
Use1Q9CQ56 Mir7046-201ENSMUST00000183435 66 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm27688-201ENSMUST00000183634 91 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Gm5066-201ENSMUST00000188479 822 ntBASIC4.86□□□□□ -1.63
Use1Q9CQ56 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Use1Q9CQ56 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms