Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scrt1Q99M85 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Scrt1Q99M85 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scrt1Q99M85 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.64□□□□□ -1.67
Scrt1Q99M85 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm37911-201ENSMUST00000193099 1545 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm25843-201ENSMUST00000122582 314 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm24628-201ENSMUST00000122761 289 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm21990-201ENSMUST00000124692 383 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm6047-201ENSMUST00000167221 574 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Mir3104-201ENSMUST00000174911 63 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm4832-201ENSMUST00000182679 399 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Mir6975-201ENSMUST00000184879 61 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm38216-201ENSMUST00000194872 1214 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm9038-201ENSMUST00000203400 604 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm44776-201ENSMUST00000207212 381 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scrt1Q99M85 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Scrt1Q99M85 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm11912-201ENSMUST00000117235 264 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm7206-201ENSMUST00000117730 508 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm15670-201ENSMUST00000117740 447 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm15981-201ENSMUST00000119196 457 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm25176-201ENSMUST00000122640 125 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm27551-201ENSMUST00000184258 77 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm42643-201ENSMUST00000200504 279 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm43919-201ENSMUST00000204303 364 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Gm18871-201ENSMUST00000218655 745 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 AV026068-220ENSMUST00000224153 1147 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 AV026068-224ENSMUST00000224827 928 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.62□□□□□ -1.67
Scrt1Q99M85 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scrt1Q99M85 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms