Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm10997-201ENSMUST00000210294 1500 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm24989-201ENSMUST00000104461 88 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm15531-201ENSMUST00000118062 252 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm25559-201ENSMUST00000157182 74 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm17155-201ENSMUST00000165969 473 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm6061-201ENSMUST00000175860 492 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm9529-201ENSMUST00000177598 579 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm18296-201ENSMUST00000192475 783 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm8823-201ENSMUST00000193158 433 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm18900-201ENSMUST00000193218 584 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm33973-201ENSMUST00000195148 534 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm42805-201ENSMUST00000196158 276 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm43418-201ENSMUST00000201334 428 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm43580-201ENSMUST00000202892 284 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm45316-201ENSMUST00000210128 162 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 AC153924.1-201ENSMUST00000220117 312 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 AC116589.1-201ENSMUST00000220634 327 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm23456-201ENSMUST00000083335 137 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.86□□□□□ -1.31
Clp1Q99LI9 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clp1Q99LI9 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clp1Q99LI9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm13428-201ENSMUST00000117540 365 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm14115-201ENSMUST00000119242 482 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm13245-201ENSMUST00000119646 260 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm8317-201ENSMUST00000121261 471 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm13009-201ENSMUST00000121307 267 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm15335-201ENSMUST00000122442 411 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm22599-201ENSMUST00000157597 132 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Gm16164-201ENSMUST00000160078 468 ntBASIC6.85□□□□□ -1.31
Clp1Q99LI9 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms