Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm4234-201ENSMUST00000119747 714 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm7346-201ENSMUST00000169661 476 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm21959-201ENSMUST00000178439 452 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm26652-202ENSMUST00000181672 475 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm8183-201ENSMUST00000183134 980 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm27004-201ENSMUST00000183300 727 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm28997-201ENSMUST00000188759 429 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm28655-201ENSMUST00000191538 692 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm6631-201ENSMUST00000193699 559 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm43096-201ENSMUST00000196173 421 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm43973-201ENSMUST00000203562 210 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm24319-201ENSMUST00000083389 107 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clrn1Q8K445 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Naip3-201ENSMUST00000118082 4208 ntBASIC5.62□□□□□ -1.51
Clrn1Q8K445 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clrn1Q8K445 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm11914-201ENSMUST00000117094 507 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm16394-201ENSMUST00000117289 675 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm14991-201ENSMUST00000119913 598 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm12103-201ENSMUST00000121892 362 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clrn1Q8K445 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm22390-201ENSMUST00000157588 325 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm25660-201ENSMUST00000158470 104 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm24733-201ENSMUST00000158863 253 ntBASIC5.61□□□□□ -1.51
Clrn1Q8K445 Gm16589-201ENSMUST00000159522 918 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms