Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm18969-201ENSMUST00000189423 730 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm38360-201ENSMUST00000195130 454 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm35648-201ENSMUST00000202304 475 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm44088-201ENSMUST00000204595 237 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm45874-201ENSMUST00000212423 346 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm9202-201ENSMUST00000223036 437 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm25005-201ENSMUST00000083812 156 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm13359-201ENSMUST00000119000 695 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm8061-201ENSMUST00000122380 350 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm4540-201ENSMUST00000170669 429 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm8993-201ENSMUST00000182182 983 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm5946-201ENSMUST00000182340 970 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm27960-201ENSMUST00000183445 184 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm27225-201ENSMUST00000183833 557 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Mir6398-201ENSMUST00000184541 102 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm20915-201ENSMUST00000191575 663 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm37989-201ENSMUST00000195202 803 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm23511-201ENSMUST00000083084 164 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Brf1Q8CFK2 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.52□□□□□ -1.36
Brf1Q8CFK2 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Brf1Q8CFK2 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.36
Brf1Q8CFK2 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Gm12985-201ENSMUST00000118376 183 ntBASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Brf1Q8CFK2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms