Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm24235-201ENSMUST00000104319 129 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm15034-201ENSMUST00000120043 349 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm15803-201ENSMUST00000120118 394 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm23537-201ENSMUST00000157536 330 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm17907-201ENSMUST00000173150 710 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm22355-201ENSMUST00000175531 96 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm27820-201ENSMUST00000183628 175 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm27541-201ENSMUST00000184078 122 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm2914-201ENSMUST00000186120 328 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm37492-201ENSMUST00000191948 376 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm44307-201ENSMUST00000204466 764 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm18850-201ENSMUST00000211578 388 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.17□□□□□ -1.42
Nup88Q8CEC0 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm14769-201ENSMUST00000118590 432 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm11975-201ENSMUST00000118772 481 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm13503-201ENSMUST00000119017 446 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nup88Q8CEC0 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Smc5-206ENSMUST00000226111 3265 ntBASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm22226-201ENSMUST00000157355 109 ntBASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm17091-201ENSMUST00000163248 357 ntBASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup88Q8CEC0 Gm27266-201ENSMUST00000184521 123 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms