Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm13195-201ENSMUST00000117229 261 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm649-201ENSMUST00000117284 1054 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm11550-201ENSMUST00000118210 699 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm12039-201ENSMUST00000118219 180 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm22725-201ENSMUST00000158092 110 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm24944-201ENSMUST00000158330 128 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Mir3110-201ENSMUST00000175053 80 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm6137-201ENSMUST00000187552 578 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm28061-201ENSMUST00000189085 807 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm29454-201ENSMUST00000190805 393 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm29011-201ENSMUST00000191059 712 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm18007-201ENSMUST00000205019 844 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm45610-201ENSMUST00000209227 784 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.13□□□□□ -1.43
Atg4aQ8C9S8 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm12717-201ENSMUST00000118427 983 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm4853-201ENSMUST00000119359 394 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm15390-201ENSMUST00000120323 738 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm37884-201ENSMUST00000191857 818 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 AC131720.3-201ENSMUST00000219113 275 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Atg4aQ8C9S8 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm22730-201ENSMUST00000158085 171 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm20545-201ENSMUST00000174739 210 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm19189-201ENSMUST00000221689 754 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Gm5215-201ENSMUST00000054380 405 ntBASIC6.11□□□□□ -1.43
Atg4aQ8C9S8 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms