Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm26340-201ENSMUST00000102365 99 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm15216-201ENSMUST00000118058 277 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm9059-201ENSMUST00000118319 183 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm6664-201ENSMUST00000119138 468 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm11504-201ENSMUST00000120211 173 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm14925-201ENSMUST00000120611 438 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm22478-201ENSMUST00000122570 154 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm23030-201ENSMUST00000158004 273 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm25675-201ENSMUST00000174979 118 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm44370-201ENSMUST00000175436 112 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm6061-201ENSMUST00000175860 492 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm18849-201ENSMUST00000189861 560 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm2229-201ENSMUST00000193328 710 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm37341-201ENSMUST00000194680 371 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm4501-201ENSMUST00000207330 551 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm4528-201ENSMUST00000207905 551 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm17991-201ENSMUST00000208139 297 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm45530-201ENSMUST00000211658 225 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm2099-201ENSMUST00000220979 412 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm7887-201ENSMUST00000056948 537 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm18432-201ENSMUST00000195568 1451 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim47Q8C0E3 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Mir708-201ENSMUST00000102189 109 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm26079-201ENSMUST00000104066 133 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm24079-201ENSMUST00000104352 132 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm26144-201ENSMUST00000104475 132 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm15621-201ENSMUST00000119162 364 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm5793-201ENSMUST00000119393 630 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm12229-201ENSMUST00000120487 468 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm16016-201ENSMUST00000120831 550 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm22820-201ENSMUST00000157205 329 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm22361-201ENSMUST00000158435 176 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm18808-201ENSMUST00000173316 462 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm24415-201ENSMUST00000180218 107 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm27999-201ENSMUST00000183539 193 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm21088-201ENSMUST00000190875 316 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm37616-201ENSMUST00000193974 322 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm43048-201ENSMUST00000196101 388 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC7.35□□□□□ -1.23
Trim47Q8C0E3 Gm43669-201ENSMUST00000198229 436 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms