Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm44735-201ENSMUST00000206197 1752 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm13755-201ENSMUST00000118509 305 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm12311-201ENSMUST00000118803 374 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm13666-201ENSMUST00000120032 799 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm6574-201ENSMUST00000120037 362 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm11819-201ENSMUST00000122192 372 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Rpl37rt-202ENSMUST00000124641 294 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm25348-201ENSMUST00000158961 111 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm26157-201ENSMUST00000158974 126 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm16184-201ENSMUST00000162324 573 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm22633-201ENSMUST00000179834 107 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Mir6930-201ENSMUST00000183859 68 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm29350-201ENSMUST00000189141 541 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm44896-201ENSMUST00000206190 772 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim35Q8C006 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Kbtbd4-202ENSMUST00000111464 2343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Wdr12-203ENSMUST00000122038 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim35Q8C006 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Gm6554-201ENSMUST00000220592 1912 ntBASIC8.31□□□□□ -1.08
Trim35Q8C006 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
Trim35Q8C006 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm25608-201ENSMUST00000104021 132 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm23840-201ENSMUST00000116950 97 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm15464-201ENSMUST00000118718 431 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm12308-201ENSMUST00000120440 389 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm11761-201ENSMUST00000121392 445 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm26278-201ENSMUST00000157098 132 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm25190-201ENSMUST00000176664 95 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm4308-201ENSMUST00000179735 914 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim35Q8C006 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm19123-201ENSMUST00000190716 651 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm38044-201ENSMUST00000192964 487 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm42459-201ENSMUST00000199679 742 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm44306-201ENSMUST00000203058 203 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm45380-201ENSMUST00000210465 315 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim35Q8C006 AC159896.1-201ENSMUST00000215264 215 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm5668-201ENSMUST00000220897 436 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 Gm10054-201ENSMUST00000223362 431 ntBASIC8.3□□□□□ -1.08
Trim35Q8C006 AC168880.2-201ENSMUST00000224488 201 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms